BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017G07LP1|AL427204
(979 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1676 1810 0.0
>3x_Contig1676
Length = 15800
Score = 1810 bits (909), Expect = 0.0
Identities = 965/983 (98%), Gaps = 4/983 (0%)
Strand = Plus / Plus
Query: 1 tcttgcacccgctgctacaccagagcaaaatatgaatatagataaatttggttcgatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tcttgcacccgctgctacaccagagcaaaatatgaatatagataaatttggttcgatgct 261
Query: 61 gtctgatcagcaacgcctcgttaaaccattggacttcagtgttaagataaaatcaaccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtctgatcagcaacgcctcgttaaaccattggacttcagtgttaagataaaatcaaccgt 321
Query: 121 catagaggaagaagattcccattcaactttgcctgaggatgatggattggaggttgacga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 catagaggaagaagattcccattcaactttgcctgaggatgatggattggaggttgacga 381
Query: 181 agacgatagtttgataacgacaaacacaatacaaaagcttaaagcacaactctccaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agacgatagtttgataacgacaaacacaatacaaaagcttaaagcacaactctccaatat 441
Query: 241 ttcatcggatgaagaggaagaagatgcagtggacgctgaactggaaacaggacaagagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttcatcggatgaagaggaagaagatgcagtggacgctgaactggaaacaggacaagagga 501
Query: 301 tgaagaggagcaggaacaggaggattcaacacaacacatggactctttagaagtccaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgaagaggagcaggaacaggaggattcaacacaacacatggactctttagaagtccaaaa 561
Query: 361 tgtggttgacaatgttatagaaacgaaagawaacccatgttcggatcgtcagttttcagt 420
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 562 tgtggttgacaatgttatagaaacgaaagaaaacccatgtacggatcgtcagttttcagt 621
Query: 421 tagcgatgcaaactctaaaagtgatgttcctgccttgcagaacgaagaggtatcagttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tagcgatgcaaactctaaaagtgatgttcctgccttgcagaacgaagaggtatcagttga 681
Query: 481 cactgcatctatcgccataaattctgtggaaattcccagtacaccggctaatgatacaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 cactgcatctatcgccataaattctgtggaaattcccagtacaccggctaatgatacaga 741
Query: 541 wacttctctatcatcaaaggaagctaatwttgaggaaagttaaccagagawaattcttga 600
||||||||||||||||||||||| ||| ||||||||||| ||||||||| |||||||||
Sbjct: 742 aacttctctatcatcaaaggaagcaaatattgaggaaagtaaaccagagaaaattcttga 801
Query: 601 acaaggttttgawagcgccataccactttctcaggatgagctaaatagggtcagctgtga 660
|||||||||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||
Sbjct: 802 acaaggttttgaaagcgccaaaccactttctcaggatgagcaaaaaagggtcagctgtga 861
Query: 661 tacagcaggttcctttcaggatgcatctagcgtgctgataagagatgatagtagtttaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 tacagcaggttcctttcaggatgcatctagcgtgctgataagagatgatagtagtttaaa 921
Query: 721 ctccgaaacgcacaacacaggtcaagaggatcacaatcaatcatcagtagcaactacggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 ctccgaaacgcacaacacaggtcaagaggatcacaatcaatcatcagtagcaactacggc 981
Query: 781 tggatctgctgtgaccgaaaaacagaatgttgatactgaaattgggagtgacagahactc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 982 tggatctgctgtgaccgaaaaacagaatgttgatactgaaattgggagtgacagaaactc 1041
Query: 841 caaggcaatatcagagagtgacaaaaacgatgaagccactagcaagagtatatctctgac 900
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1042 caaggcaatatcagagagtgacaaaaacgatgaagcaactagcaagagtatatctctgac 1101
Query: 901 tccaaataacaggcttatgcgagcctctgctcttatagaa-cacagtcttctcc-aatga 958
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 1102 tccaaataacaggcttatgcgagcctctgctcttatagaaccacagtcttctccaaatga 1161
Query: 959 tat-mtcaatga-ctgattgata 979
||| ||||||| ||||||||||
Sbjct: 1162 tatactcaatgacctgattgata 1184
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6308
Number of Sequences: 1807
Number of extensions: 6308
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 979
length of database: 10,358,551
effective HSP length: 16
effective length of query: 963
effective length of database: 10,329,639
effective search space: 9947442357
effective search space used: 9947442357
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)